|
109
|
Y15794
Theileria annulata
|
Spm1 protein
|
actcgtgccgaattcggcacgagg
TRAEFGTR
|
Mol. Biochem. Parasitol. 100, 135-140. 1999.
|
|
110
|
AF332963
Polytomella sp.
|
5'UTR for Ferrochelatase
|
cctcgtgccgaattcggcacgaggcctcgtgccgaattcggcacgagg
|
Atteia et al. [Unpublished].
|
|
111
|
AJ416378
Polytomella sp.
|
5'UTR for Cyc
|
ggcacgaggcctcgtgccgaattcggcacgaggga
|
Atteia A. [Unpublished].
|
|
112
|
AY093683 Suaeda maritima
|
5'UTR for Mitogen-activated protein kinase
kinase
|
ggcacgaggcctcgtgccgaattcggcacgaggga
|
Yin et al. [Unpublished].
|
|
113
|
AF043384
Pleuronectes americanus
|
Beta actin (ACT1)
|
cgagctcgtgccgaattc
ELVPNS
|
J. Appl. Ichthyol. 15, 80-86. 1999; Mar
Biotechnol (NY). 1, 458-0464. 1999.
|
|
114
|
AY206000
Malva pusilla
|
Glutathione S-transferase F1
|
aggaattcggcacgagca
RNSARA
|
Goodwin et al. [Unpublished].
|
|
115
|
AF499715 Thellungiella halophila
|
5'UTR for Lipid transfer protein 4-like protein
|
aattcggcacgaggcctcgtgccgaattcggcacgagg
|
Plant Sci. 166, 609-616. 2004.
|
|
116
|
AF279454 Lycopersicon esculentum
|
Sesquiterpene synthase 2 (Sstle2)
|
ctcgtgccgaattcggcacgagct
LVPNSARA
|
Plant Cell. 12, 2283-94. 2000.
|
|
117
|
AF332957
Lycopersicon esculentum
|
Fructose-1,6-bisphosphate aldolase
|
aattcggcacgagctc
NSARAQ
|
Zurek and Rayle. Auxin Regulation.
[Unpublished]; Plant Physiol. 104, 505-513. 1994.
|
|
118
|
AY157614 Ficus carica
|
5'UTR for Chitinase
|
ggcacgaggcctcgtgccgaattcggcacgagg
|
Plant Cell Physiol. 44, 412-414. 2003.
|
|
119
|
AY089962 Solanum tuberosum
|
Cysteine proteinase inhib. Prec. P7G8, Kunitz-type
|
tcgtgccgaattcggcacgagtt
VPNSARV
|
Mol. Genet. Genomics 269, 526-534. 2003.
|
|
120
|
AY098939 Solanum tuberosum
|
Amino-cyclopropane-1-carboxylate oxidase (Aco)
[ESTs in both sides]
|
gctcgtgccgaattcggcacgagc
ARAEFGTS
|
J. Exp. Bot. 53, 2455-7. 2002.
|
|
121
|
X93160
Spinacia oleracea
|
5' UTR & 3' UTR for Ribosomal protein L4
|
aattcggcacgagctc & agctcgtgccgaattc
|
J. Biol. Chem. 273, 3980-3985. 1998.
|
|
122
|
AY324804
Nicotiana tabacum
|
mRNA-binding protein (csp41), nuclear gene for chloroplast product
|
cactcgtgccgaattcggcacgag
HSCRIRHE
|
Plant J. 36, 842-852. 2003; Nucleic Acids Res. 31,
4317-4325. 2003.
|
|
123
|
AF242734
Capsicum annuum
|
Putative proteinase inhibitor II
|
cccgtgccgaattcggcacgaa
PVPNSARK
|
Plant Sci. 161, 727-737. 2001.
|
|
124
|
AF467542
Triticum aestivum
|
Gene for putative aldehyde dehydrogenase Wis1
|
gaattcggcacgagctc
|
Plant Physiol. 129 (1), 169-180. 2002.
|
|
125
|
M95818 & M95819
Triticum aestivum
|
5'UTR for initiation factor isozyme 4F p28 subunit
|
gaattcggcacgagctc
|
J. Biol. Chem. 267, 23232-23236. 1992.
|
|
126
|
AY387686
Triticum aestivum
|
5'UTR for harpin binding protein 1 (HrBP1-1)
|
gaattcggcacgagct
|
Song et al. [Unpublished].
|
|
127
|
BT009402
Triticum aestivum
|
mRNA for clone wlm96.pk046.j8:fis
|
ctcgtgccgaattcggcacgagctcgtgccgaattcggcacgagg
|
Tingey et al. [Direct Submission].
|
|
128
|
NM_188717
Oryza sativa
|
Hypothetical protein
|
ggcgagctcgtgccgaattag
GELVPN
|
The NCBI Genome Assembly Consortium [Submitted: 01-JUL-2004]
|
|
129
|
AF001501
Oryza sativa
|
MIRCH38 chitinase
|
ggcacgagctcgtgccgaattcggcacgag
GTSSCRIRHE
|
Yun et al. Rice chitinase. [Unpublished]; Mol. Cells.
17, 10-6. 2004.
|
|
130
|
Y12594
Oryza sativa
|
Fd-GOGAT, 2 hours anaerobic coleoptiles
|
gaattcggcacgagctca
EFGTSS
|
Mattana et al. [Unpublished,
Submitted 1997]
|
|
131
|
AF290415
Zea mays
|
Crs1, splicing nuclear gene for chloroplast
|
attcggcacgagcga
IRHER
|
RNA 7, 1227-1238. 2001.
|
|
132
|
AF126054 & AY110620
Zea mays
|
mRNA, 5'UTR for Rop3 small GTP binding protein & CL1205_2
|
gaattcggcacgagct
|
Biochem. Biophys. Res. Commun. 272, 783-788. 2000; Plant Physiol. 133,
1791-808. 2003; Hainey et al.
|
|
133
|
BT016274 & BT016336
Zea mays
|
mRNA from Contigs [i.e., L: Starch
branching enzyme II. R: Polyubiquitin]
|
cctcgtgccgaattcggcacgaggcctcgtgccgaa-tcggcacgagg
|
Genome Res. 14(10A): 1932-7. 2004.
|
|
134
|
Y10252
Lotus corniculatus var. japonicus
|
5'UTR for Pantoate-beta-alanine ligase (PanC)
|
gaattcggcacgagctc
|
Biochem. J. 341 (Pt 3), 669-678. 1999.
|
|
135
|
AJ271664
Cicer arietinum
|
Hypothetical protein, ORF, putative metallophosphatase (ppd4)
|
ctcgtgccgaattcggcacgagt
RAEFGTS
|
Dopico et al. cDNA in chickpea epicotyls. [Unpublished]; Plant Mol Biol. 35, 433-42. 1997.
|
|
136
|
AJ271659
Cicer arietinum
|
Serine carboxipeptidase
|
gagcggcacgagctcgtgccgac
ERHELVPT
|
Dopico et al. Serine carboxipeptidase in chickpea epicotyls. [Unpublished].
|
|
137
|
X88864
Medicago sativa
|
5'UTR for for cyclin protein (CycMs4)
|
gaattcggcacgagctc
|
Plant Cell 7, 1847-1857. 1995.
|
|
138
|
U14956
Vicia faba
|
5'UTR for Ferredoxin NADP+ reductase
precursor (fnr)
|
gaattcggcacgagct
|
Lax and Cary. [Unpublished].
|
|
139
|
AY220737
Hordeum vulgare
|
lipoxygenase 1 protein
(LOXA)
|
gctcgtgccgaattcggcacgagg
ARAEFGTR
|
Mol. Plant Microbe Interact. 16, 893-902. 2003.
|
|
140
|
AF034387
Arabidopsis thaliana
|
AFT protein
|
gctcgtgccgaattcggcacgagc
ARAEFGTS
|
Plant Physiol. 117, 1526-1526. 1998.
|
|
141
|
M90510
Arabidopsis thaliana
|
mRNA, 5'UTR for thaumatin-like
|
ggcacgagctcgtgcaattcggccgaattcggcacgag
|
Plant Cell 4, 645-656. 1992.
|
|
142
|
AF001136
Pinus radiata
|
5'UTR & CDS for Zinc finger protein (PrCO)
|
ggcacgagctcgtgccgaattcggcacgagcgctcgtgccgaattcggcacgagctc & gc
ASCRIRHEL
|
Mouradov et al. [Direct Submission]; Plant Physiol. 117,
55-62. 1998.
|
|
143
|
U31309
Pinus taeda
|
Chitinase homolog LP 6 (9th CDS)
|
ctcgtgccgaattcggca
LVPNSA
|
Plant Mol Biol. 31, 693-9. 1996.
|
|
144
|
AY098893 Plastid Citrus hybrid cultivar
|
Plastidic ATP/ADP transporter
|
gaattcggcacgagctta
EFGTSL
|
Planta 217, 11-20. 2003.
|
|
145
|
AF195867 Vitis vinifera
|
Alcohol dehydrogenase 7 (Adh7) [R: ADH6 and ADH2]
|
actcgtgccgaattcggcacgagctcgtgccgaattcggcacgag
TRAEFGTSCRIRHE
|
Plant Physiol. 122, 619. 2000.
|
|
146
|
NM_214643 & AY187547
Strongylocentrotus purpuratus
|
5'UTR for heat shock protein Gp96
|
gccgaattcggcacgag
|
Dev. Comp. Immunol. 27, 449-464. 2003; J. Immunol. 156,
593-602. 1996.
|
|
147
|
U22507
Heliocidaris tuberculata
|
5'UTR for cytoplasmic actin type III (htcyIII)
|
attcggcacgagctcg
|
Mol. Biol. Evol. 14, 654-665. 1997.
|
|
148
|
AF015712
Dictyostelium discoideum
|
Kinesin-related protein K2
|
atccgaattcggcacgag
IRIRHE
|
de Hostos et al. [Direct Submission]; J. Biol. Chem. 273,
793-9. 1998.
|
|
149
|
AJ006788
Coprinus cinereus
|
RedA
|
gaattcggcacgagctca
EFGTSS
|
Brander KA [Unpublished].
|
|
150
|
U44431
Trametes versicolor
|
5'UTR for laccase IV (lccIV)
|
ggcacgagctcgtgccg
|
Gene 196, 113-119 1997.
|
|
Related Sequences Included for Comparison (Predicted, Genomic or
Prokaryotic)
|
|
A
|
NM_173552 & BC037293 Homo sapiens
|
Predicted Hypothetical protein MGC33365
|
ttcggcacgagctggtgccgc
FGTSWCR
|
Nat. Genet. 36, 40-45. 2004; Proc. Natl. Acad. Sci. U.S.A.
99, 16899-16903. 2002.
|
|
B
|
XM_147036
Mus musculus
|
Predicted RIKEN cDNA 1190002N15
|
ttcggcacgagctggtgccgt
FGTSWCR
|
Model Refseq, Gnomon gene prediction plus
EST evidence
|
|
C
|
XM_236493
Rattus norvegicus
|
Predicted Similar to Ab2-095 (Loc315891)
|
ttcggcacgagctggtgccgc
FGTSWCR
|
Model Refseq, Gnomon gene prediction plus
EST evidence
|
|
D
|
AC103936
Mus musculus
|
Chromosome 9
|
ttcggcacgagctggtgccg
|
Birren et al. [Direct Submission]; Nature
420, 520-62. 2002; Nat. Genet. 22, 388-93. 1999.
|
|
E
|
AC117379
Homo sapiens
|
3 BAC RP11-392C7 (Roswell Park CIHBAC Library), complete sequence
|
cggcaccagctcgtgccgaa
|
Muzny et al. [Direct Submission].
|
|
F
|
AL929103 & CR318657
Danio rerio
|
Complete Sequence
|
gctcgtgccgaattc & ctcgtgccgaattc
|
Almeida J. [Direct Submission]; Barker G. [Direct
Submission].
|
|
G
|
AE008692
Zymomonas mobilis
|
Complete Genome
|
tgccgaattcggcac (plus at least 3 more smaller, to 12 b, instances)
|
Nat Biotechnol. 2004 Dec 12; [Epub ahead of print].
|
|
H
|
AE017172 & AE017178
Porphyromonas gingivalis
|
2 Sections of the Complete Genome
|
ccgaattcggcacgag (plus at least 4 more smaller, to 12 b, instances)
|
J. Bacteriol. 185, 5591-5601. 2003.
|
|
I
|
CP000010
Burkholderia mallei
|
Chromosomes, complete sequences
|
acgagctcgtgccga (plus at least 50/Ch, smaller, to 12 b, instances)
|
Proc. Natl. Acad. Sci. U.S.A. 101, 14247-14251. 2004. (er).
|
|
J
|
BX571965 & BX571966
Burkholderia pseudomallei
|
Chromosomes 1 & 2, complete sequence
|
ttcggcacgagctcg (plus at least 30/Ch, smaller, to 12 b, instances)
|
Proc. Natl. Acad. Sci. U.S.A. 101, 14240-14245. 2004.
|
|
K
|
AE016994
Chlamydophila caviae
|
Sections of the Complete Genome
|
cggcacgagctcgtg
& ttcggcacgagct
|
Nucleic Acids Res. 31, 2134-2147. 2003.
|
|
L
|
AY307892
Uncultured Actinobacterium
|
rRNA of Actinomycete
|
cacgagctcgtgccg
|
Piza & Manfio. Actinomycete diversity. [Unpublished].
|
|
M
|
STRSTRH
Streptococcus pneumoniae
|
3' UTR for Beta-N-acetylhexosaminidase (strH)
|
agctcgtgccgaattc
|
J. Biol. Chem. 270, 8805-8814. 1995.
|
|
N
|
BX572599
Rhodopseudomonas palustris
|
Segment of the Complete Genome
|
gtgccgaattcg , gccgaattcggca , cgtgccgaattcggc
|
Nat. Biotechnol. 22, 55-61. 2004.
|
|
O
|
AE011864
Xanthomonas axonopodis
|
Section 242 of 469 of the complete genome
|
Acgagctcgtgccga
|
Nature 417, 459-463. 2002.
|
|
P
|
XM_323355 & XM_323891
Neurospora crassa
|
Genome of N. crassa strain OR74A
|
cgagctcgtgccgaa &
cggcacaagctcgtgccga
|
Nature 422, 859-868. 2003.
|
